4DIM

Crystal structure of phosphoribosylglycinamide synthetase from Anaerococcus prevotii


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.61 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.184 
  • R-Value Observed: 0.186 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of phosphoribosylglycinamide synthetase from Anaerococcus prevotii

Michalska, K.Wu, R.Clancy, S.Joachimiak, A.Midwest Center for Structural Genomics (MCSG)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Phosphoribosylglycinamide synthetaseA403Anaerococcus prevotii DSM 20548Mutation(s): 0 
Gene Names: Apre_1268
UniProt
Find proteins for C7RDM8 (Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1))
Explore C7RDM8 
Go to UniProtKB:  C7RDM8
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 125.27α = 90
b = 84.467β = 100.54
c = 49.642γ = 90
Software Package:
Software NamePurpose
SBC-Collectdata collection
Auto-Rickshawphasing
SHELXmodel building
ABSmodel building
HELICAPmodel building
BUCCANEERmodel building
Cootmodel building
BUSTERrefinement
HKL-3000data reduction
HKL-3000data scaling
SHELXphasing
MLPHAREphasing
DMphasing
ARP/wARPmodel building

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-02-29
    Type: Initial release