4BWJ

KlenTaq mutant in complex with DNA and ddCTP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.158 
  • R-Value Observed: 0.161 

wwPDB Validation   3D Report Full Report


This is version 1.5 of the entry. See complete history


Literature

Structure and Function of an RNA-Reading Thermostable DNA Polymerase.

Blatter, N.Bergen, K.Nolte, O.Welte, W.Diederichs, K.Mayer, J.Wieland, M.Marx, A.

(2013) Angew Chem Int Ed Engl 52: 11935


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
DNA POLYMERASE I, THERMOSTABLEA540Thermus aquaticusMutation(s): 4 
Gene Names: polApol1
EC: 2.7.7.7
Find proteins for P19821 (Thermus aquaticus)
Explore P19821 
Go to UniProtKB:  P19821
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 2
    MoleculeChainsLengthOrganismImage
    5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOCP)-3'B12synthetic construct
    • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 3
      MoleculeChainsLengthOrganismImage
      5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP)-3'C16synthetic construct
      Small Molecules
      Ligands 2 Unique
      IDChainsName / Formula / InChI Key2D Diagram3D Interactions
      DCT
      Query on DCT

      Download Ideal Coordinates CCD File 
      D [auth A]2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE
      C9 H16 N3 O12 P3
      ARLKCWCREKRROD-POYBYMJQSA-N
       Ligand Interaction
      MG
      Query on MG

      Download Ideal Coordinates CCD File 
      E [auth A], F [auth A], G [auth A], H [auth B], I [auth B]MAGNESIUM ION
      Mg
      JLVVSXFLKOJNIY-UHFFFAOYSA-N
       Ligand Interaction
      Experimental Data & Validation

      Experimental Data

      • Method: X-RAY DIFFRACTION
      • Resolution: 1.55 Å
      • R-Value Free: 0.201 
      • R-Value Work: 0.158 
      • R-Value Observed: 0.161 
      • Space Group: P 31 2 1
      Unit Cell:
      Length ( Å )Angle ( ˚ )
      a = 108.143α = 90
      b = 108.143β = 90
      c = 89.81γ = 120
      Software Package:
      Software NamePurpose
      PHENIXrefinement
      XDSdata reduction
      XDSdata scaling
      PHENIXphasing

      Structure Validation

      View Full Validation Report



      Entry History 

      Deposition Data

      Revision History  (Full details and data files)

      • Version 1.0: 2013-09-18
        Type: Initial release
      • Version 1.1: 2013-10-02
        Changes: Atomic model
      • Version 1.2: 2013-10-23
        Changes: Database references
      • Version 1.3: 2013-12-25
        Changes: Database references
      • Version 1.4: 2015-09-23
        Changes: Data collection, Database references, Source and taxonomy
      • Version 1.5: 2019-05-08
        Changes: Data collection, Derived calculations, Experimental preparation, Other