3ZTE

Crystal Structure of the TRP RNA-Binding Attenuation Protein (TRAP) from Bacillus Licheniformis.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.41 Å
  • R-Value Free: 0.346 
  • R-Value Work: 0.281 
  • R-Value Observed: 0.284 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of the Trp RNA-Binding Attenuation Protein (Trap) from Bacillus Licheniformis.

Shevtsov, M.B.Chen, Y.Gollnick, P.Antson, A.A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
TRYPTOPHAN OPERON RNA-BINDING ATTENUATION PROTEIN (TRAP)
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V
78Bacillus licheniformisMutation(s): 0 
UniProt
Find proteins for A5A665 (Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46))
Explore A5A665 
Go to UniProtKB:  A5A665
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA5A665
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
TRP
Query on TRP

Download Ideal Coordinates CCD File 
AA [auth E],
BA [auth F],
CA [auth G],
DA [auth H],
EA [auth I],
AA [auth E],
BA [auth F],
CA [auth G],
DA [auth H],
EA [auth I],
FA [auth J],
GA [auth K],
HA [auth L],
IA [auth M],
JA [auth N],
KA [auth O],
LA [auth P],
MA [auth Q],
NA [auth R],
OA [auth S],
PA [auth T],
QA [auth U],
RA [auth V],
W [auth A],
X [auth B],
Y [auth C],
Z [auth D]
TRYPTOPHAN
C11 H12 N2 O2
QIVBCDIJIAJPQS-VIFPVBQESA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.41 Å
  • R-Value Free: 0.346 
  • R-Value Work: 0.281 
  • R-Value Observed: 0.284 
  • Space Group: P 41 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 145.427α = 90
b = 145.427β = 90
c = 183.071γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-10-12
    Type: Initial release
  • Version 1.1: 2019-03-06
    Changes: Data collection, Experimental preparation, Other