3ZTE

Crystal Structure of the TRP RNA-Binding Attenuation Protein (TRAP) from Bacillus Licheniformis.

• PDB DOI:  https://doi.org/10.2210/pdb3ZTE/pdb

• Classification: RNA BINDING PROTEIN
• Organism(s): Bacillus licheniformis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2011-07-07 Released: 2011-10-12 
• Deposition Author(s): Shevtsov, M.B., Chen, Y., Gollnick, P., Antson, A.A.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.41 Å
• R-Value Free: 0.346 
• R-Value Work: 0.281 
• R-Value Observed: 0.284 

Literature

Crystal Structure of the Trp RNA-Binding Attenuation Protein (Trap) from Bacillus Licheniformis.

Shevtsov, M.B., Chen, Y., Gollnick, P., Antson, A.A.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C11  (3D View)
Global Stoichiometry: Homo 11-mer - A11 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Cyclic - C11  (3D View)
Global Stoichiometry: Homo 11-mer - A11 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 195.45 kDa 
• Atom Count: 12,416 
• Modelled Residue Count: 1,522 
• Deposited Residue Count: 1,716 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TRYPTOPHAN OPERON RNA-BINDING ATTENUATION PROTEIN (TRAP)	A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V	78	Bacillus licheniformis	Mutation(s): 0
UniProt
Find proteins for A5A665 (Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)) Explore A5A665  Go to UniProtKB:  A5A665

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
TRP	AA [auth E], BA [auth F], CA [auth G], DA [auth H], EA [auth I], FA [auth J], GA [auth K], HA [auth L], IA [auth M], JA [auth N], KA [auth O], LA [auth P], MA [auth Q], NA [auth R], OA [auth S], PA [auth T], QA [auth U], RA [auth V], W [auth A], X [auth B], Y [auth C], Z [auth D]	TRYPTOPHAN C11 H12 N2 O2 QIVBCDIJIAJPQS-VIFPVBQESA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.41 Å
• R-Value Free: 0.346 
• R-Value Work: 0.281 
• R-Value Observed: 0.284 
• Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 145.427	α = 90
b = 145.427	β = 90
c = 183.071	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-10-12 
Deposition Author(s): Shevtsov, M.B., Chen, Y., Gollnick, P., Antson, A.A.

Revision History  

• Version 1.0: 2011-10-12
  Type: Initial release
  
• Version 1.1: 2019-03-06
  Changes: Data collection, Experimental preparation, Other