3UOW

Crystal Structure of PF10_0123, a GMP Synthetase from Plasmodium Falciparum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.72 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.259 
  • R-Value Observed: 0.261 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of PF10_0123, a GMP Synthetase from Plasmodium Falciparum

Wernimont, A.K.Dong, A.Hills, T.Amani, M.Perieteanu, A.Lin, Y.H.Loppnau, P.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Weigelt, J.Hui, R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
GMP synthetaseAB556Plasmodium falciparum 3D7Mutation(s): 0 
Gene Names: PF10_0123PF3D7_1012600
EC: 6.3.5.2
Find proteins for Q8IJR9 (Plasmodium falciparum (isolate 3D7))
Explore Q8IJR9 
Go to UniProtKB:  Q8IJR9
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
XMP
Query on XMP

Download CCD File 
A, B
XANTHOSINE-5'-MONOPHOSPHATE
C10 H14 N4 O9 P
DCTLYFZHFGENCW-UUOKFMHZSA-O
 Ligand Interaction
CA
Query on CA

Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.72 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.259 
  • R-Value Observed: 0.261 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 43.158α = 103.07
b = 67.76β = 99.36
c = 99.825γ = 94.33
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
macChessdata collection
DENZOdata reduction
SCALEPACKdata scaling
BALBESphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-12-07
    Type: Initial release
  • Version 1.1: 2017-11-08
    Changes: Refinement description