Identification of the SSB-interaction platform of Escherichia coli uracil-DNA glycosylase
George, N.P., Liban, T.J., Reyes-Lamothe, R., Keck, J.L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uracil-DNA glycosylase | 237 | Escherichia coli K-12 | Mutation(s): 0  Gene Names: b2580, JW2564, ung EC: 3.2.2.27 | ||
UniProt | |||||
Find proteins for P12295 (Escherichia coli (strain K12)) Explore P12295  Go to UniProtKB:  P12295 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P12295 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Single-stranded DNA-binding protein | 9 | Escherichia coli | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P0AGE0 (Escherichia coli (strain K12)) Explore P0AGE0  Go to UniProtKB:  P0AGE0 | |||||
Entity Groups   | |||||
UniProt Group | P0AGE0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | D [auth A], E [auth A], F [auth A], G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
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a = 118.204 | α = 90 |
b = 118.204 | β = 90 |
c = 47.098 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |