3U27

Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.182 
  • R-Value Work: 0.157 
  • R-Value Observed: 0.158 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b

Wu, R.Gu, M.Kerfeld, C.A.Salmeen, A.Joachimiak, A.Midwest Center for Structural Genomics (MCSG)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Microcompartments proteinB [auth A], C [auth B], A [auth C], D, E, F220Leptotrichia buccalis C-1013-bMutation(s): 0 
Gene Names: Lebu_0063
UniProt
Find proteins for C7NCS6 (Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b))
Explore C7NCS6 
Go to UniProtKB:  C7NCS6
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download Ideal Coordinates CCD File 
H [auth C] , I [auth C] , O [auth A] , P [auth A] , Q [auth A] , S [auth B] , T [auth D] , U [auth F] , 
H [auth C], I [auth C], O [auth A], P [auth A], Q [auth A], S [auth B], T [auth D], U [auth F], V [auth F]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

Download Ideal Coordinates CCD File 
G [auth C], J [auth C], M [auth A], N [auth A]CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
NA
Query on NA

Download Ideal Coordinates CCD File 
K [auth C], L [auth C], R [auth A]SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A [auth C], B [auth A], C [auth B], D, E, FL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 100.854α = 90
b = 105.644β = 90.06
c = 101.551γ = 90
Software Package:
Software NamePurpose
HKL-3000data collection
MLPHAREphasing
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-02-08
    Type: Initial release
  • Version 1.1: 2012-03-28
    Changes: Other
  • Version 1.2: 2012-04-11
    Changes: Database references, Structure summary
  • Version 1.3: 2012-09-12
    Changes: Database references, Structure summary
  • Version 1.4: 2020-01-29
    Changes: Advisory, Database references, Derived calculations