3TBF

C-terminal domain of glucosamine-fructose-6-phosphate aminotransferase from Francisella tularensis.

PDB DOI: https://doi.org/10.2210/pdb3TBF/pdb

Classification: TRANSFERASE
Organism(s): Francisella tularensis subsp. tularensis
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2011-08-05 Released: 2011-08-24
Deposition Author(s): Osipiuk, J., Zhou, M., Maltseva, N., Kim, Y., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.28 Å
R-Value Free: 0.232
R-Value Work: 0.172
R-Value Observed: 0.175

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

C-terminal domain of glucosamine-fructose-6-phosphate aminotransferase from Francisella tularensis.

Osipiuk, J., Zhou, M., Maltseva, N., Kim, Y., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecule Content

Total Structure Weight: 330.39 kDa
Atom Count: 22,905
Modelled Residue Count: 2,856
Deposited Residue Count: 2,976
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]	A, B, C, D, E A, B, C, D, E, F, G, H	372	Francisella tularensis subsp. tularensis	Mutation(s): 0 Gene Names: FTT_0388, glmS EC: 2.6.1.16
UniProt
Find proteins for Q5NHQ9 (Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)) Explore Q5NHQ9 Go to UniProtKB: Q5NHQ9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5NHQ9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B, C, D, E A, B, C, D, E, F, G, H	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.28 Å
R-Value Free: 0.232
R-Value Work: 0.172
R-Value Observed: 0.175
Space Group: P 1 2₁ 1
Diffraction Data: https://doi.org/10.18430/M33TBF

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 71.37	α = 90
b = 262.911	β = 91.32
c = 83.797	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
SBC-Collect	data collection
HKL-3000	data reduction
HKL-3000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2011-08-24

Deposition Author(s):

Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History (Full details and data files)

Version 1.0: 2011-08-24
Type: Initial release
Version 1.1: 2017-11-08
Changes: Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.