Crystal structure of putative modulator of gyrase (PmbA) from Pseudomonas aeruginosa PAO1
Tkaczuk, K.L., Chruszcz, M., Evdokimova, E., Liu, F., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
PmbA protein | A, B, C, D | 449 | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | Mutation(s): 0  Gene Names: pmbA |
Find proteins for Q9HVU9 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Go to UniProtKB:  Q9HVU9 |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | A, B, C, D | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | ![]() | MET |
Length (Å) | Angle (°) |
---|---|
a = 69.385 | α = 90.00 |
b = 116.201 | β = 90.00 |
c = 253.968 | γ = 90.00 |
Software Name | Purpose |
---|---|
HKL-3000 | data reduction |
HKL-3000 | phasing |
MLPHARE | phasing |
RESOLVE | phasing |
REFMAC | refinement |
DM | model building |
Coot | model building |
CCP4 | model building |
RESOLVE | model building |
SHELXE | model building |
DM | phasing |
CCP4 | phasing |
HKL-3000 | data collection |
HKL-3000 | data scaling |