3QFG

Structure of a putative lipoprotein from Staphylococcus aureus subsp. aureus NCTC 8325

• PDB DOI: https://doi.org/10.2210/pdb3QFG/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Staphylococcus aureus subsp. aureus NCTC 8325
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2011-01-21 Released: 2011-02-02 
• Deposition Author(s): Filippova, E.V., Halavaty, A., Shuvalova, L., Minasov, G., Dubrovska, I., Winsor, J., Kiryukhina, O., Papazisi, L., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.08 Å
• R-Value Free: 0.276 
• R-Value Work: 0.233 
• R-Value Observed: 0.235 

Literature

Structure of a putative lipoprotein from Staphylococcus aureus subsp. aureus NCTC 8325

Filippova, E.V., Halavaty, A., Shuvalova, L., Minasov, G., Dubrovska, I., Winsor, J., Kiryukhina, O., Papazisi, L., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 generated by PISA (software)

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 57.93 kDa 
• Atom Count: 2,380 
• Modelled Residue Count: 288 
• Deposited Residue Count: 484 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B	242	Staphylococcus aureus subsp. aureus NCTC 8325	Mutation(s): 0  Gene Names: SAOUHSC_00808
UniProt
Find proteins for Q2G019 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2G019  Go to UniProtKB:  Q2G019

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.08 Å
• R-Value Free: 0.276 
• R-Value Work: 0.233 
• R-Value Observed: 0.235 
• Space Group: P 2₁ 2₁ 2₁
• Diffraction Data: https://doi.org/10.18430/m33qfg

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.346	α = 90
b = 60.739	β = 90
c = 114.385	γ = 90

Software Package:

Software Name	Purpose
Blu-Ice	data collection
HKL-3000	phasing
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-02-02 
Deposition Author(s): Filippova, E.V., Halavaty, A., Shuvalova, L., Minasov, G., Dubrovska, I., Winsor, J., Kiryukhina, O., Papazisi, L., Bagnoli, F., Falugi, F., Bottomley, M., Grandi, G., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2011-02-02
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2017-11-08
  Changes: Refinement description
• Version 1.3: 2024-11-06
  Changes: Data collection, Database references, Derived calculations, Refinement description, Structure summary