fragment based drug design on PKA
Koester, H., Craan, T., Brass, S., Heine, A., Klebe, G.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
cAMP-dependent protein kinase catalytic subunit alpha | A | 351 | Homo sapiens | Mutation(s): 0  Gene Names: PRKACA (PKACA) EC: 2.7.11.11 |
Find proteins for P17612 (Homo sapiens) Go to Gene View: PRKACA Go to UniProtKB:  P17612 |
Entity ID: 2 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
cAMP-dependent protein kinase inhibitor alpha | B | 20 | Homo sapiens | Mutation(s): 0  Gene Names: PKIA (PRKACN1) |
Find proteins for P61925 (Homo sapiens) Go to Gene View: PKIA Go to UniProtKB:  P61925 |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
2SB Query on 2SB | A | (2S)-2-amino-N'-[(1E)-(3-bromo-4-hydroxyphenyl)methylidene]-2-phenylethanehydrazide C15 H14 Br N3 O2 LFYFEEHPORTFLQ-RMNBPEERSA-N | ![]() |  Ligand Interaction |
Modified Residues  2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | ![]() | SER |
TPO Query on TPO | A | L-PEPTIDE LINKING | C4 H10 N O6 P | ![]() | THR |
Length (Å) | Angle (°) |
---|---|
a = 72.890 | α = 90.00 |
b = 75.660 | β = 90.00 |
c = 79.970 | γ = 90.00 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
PHENIX | refinement |
MAR345dtb | data collection |
PHASER | phasing |
HKL-2000 | data scaling |