Download MendeleyCrystal structure of transcriptional regulator from Listeria innocua
Michalska, K., Li, H., Gu, M., Joachimiak, A.To be published.
3OP9
Crystal structure of transcriptional regulator from Listeria innocua
- PDB DOI: 10.2210/pdb3OP9/pdb
- Classification: TRANSCRIPTION REGULATOR
- Organism(s): Listeria innocua
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2010-08-31 Released: 2010-09-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.223
- R-Value Work: 0.187
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pli0006 protein | A | 114 | Listeria innocua | Mutation(s): 0 Gene Names: pli0006 |  |
UniProt | |||||
Find proteins for Q926P6 (Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)) Explore Q926P6 Go to UniProtKB: Q926P6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q926P6 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | B [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.223
- R-Value Work: 0.187
- R-Value Observed: 0.189
- Space Group: I 4 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.12 | α = 90 |
| b = 71.12 | β = 90 |
| c = 122.13 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| SHELX | model building |
| MLPHARE | phasing |
| DM | model building |
| ARP/wARP | model building |
| Coot | model building |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| SHELX | phasing |
| DM | phasing |
Entry History
Deposition Data
- Released Date: 2010-09-15 Deposition Author(s): Michalska, K., Li, H., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2010-09-15
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance
