Download MendeleyCrystal structure of Mycobacterium tuberculosis RelJK (Rv3357-Rv3358-RelBE3)
Miallau, L., Cascio, D., Eisenberg, D.To be published.
3OEI
Crystal structure of Mycobacterium tuberculosis RelJK (Rv3357-Rv3358-RelBE3)
- PDB DOI: 10.2210/pdb3OEI/pdb
- Classification: Toxin, Protein Binding
- Organism(s): Mycobacterium tuberculosis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-08-12 Released: 2011-03-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.256
- R-Value Work: 0.203
- R-Value Observed: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RelJ (Antitoxin Rv3357) | 98 | Mycobacterium tuberculosis | Mutation(s): 0 Gene Names: Rv3357, MT3465, MTV004.14 |  | |
UniProt | |||||
Find proteins for P9WF25 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WF25 Go to UniProtKB: P9WF25 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WF25 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RelK (Toxin Rv3358) | 96 | Mycobacterium tuberculosis | Mutation(s): 0 Gene Names: Rv3358, MT3466, MTV004.15 EC: 3.1 |  | |
UniProt | |||||
Find proteins for P9WF09 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WF09 Go to UniProtKB: P9WF09 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WF09 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RelJ (Antitoxin Rv3357) | E, F | 98 | Mycobacterium tuberculosis | Mutation(s): 0 Gene Names: Rv3357, MT3465, MTV004.14 |  |
UniProt | |||||
Find proteins for P9WF25 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WF25 Go to UniProtKB: P9WF25 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WF25 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FLC Query on FLC | Q [auth C] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MLZ Query on MLZ | E, F | L-PEPTIDE LINKING | C7 H16 N2 O2 |  | LYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.256
- R-Value Work: 0.203
- R-Value Observed: 0.206
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.219 | α = 90 |
| b = 187.512 | β = 94.46 |
| c = 113.881 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| Adxv | data processing |
| DENZO | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
- Deposited Date: 2010-08-12
- Released Date: 2011-03-16 Deposition Author(s): Miallau, L., Cascio, D., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)
Revision History (Full details and data files)
- Version 1.0: 2011-03-16
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-08
Changes: Refinement description
