Crystal structure of a putative glycyl-glycine endopeptidase lytM (RUMGNA_02482) from Ruminococcus gnavus ATCC 29149 at 1.60 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative glycyl-glycine endopeptidase lytM | A | 252 | [Ruminococcus] gnavus ATCC 29149 | Mutation(s): 0  Gene Names: RUMGNA_02482 | ![]() |
Find proteins for A7B4J8 (Ruminococcus gnavus (strain ATCC 29149 / VPI C7-9)) Explore A7B4J8  Go to UniProtKB:  A7B4J8 | |||||
Protein Feature ViewExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
2PE Query on 2PE | A | NONAETHYLENE GLYCOL C18 H38 O10 YZUUTMGDONTGTN-UHFFFAOYSA-N | Ligand Interaction | ||
SO4 Query on SO4 | A | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | Ligand Interaction |
Modified Residues  1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 91.336 | α = 90 |
b = 61.572 | β = 108.5 |
c = 52.804 | γ = 90 |
Software Name | Purpose |
---|---|
SHELX | phasing |
REFMAC | refinement |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
SHELXD | phasing |
autoSHARP | phasing |