3NQ4

30mer structure of Lumazine synthase from Salmonella typhimurium LT2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.50 Å
  • R-Value Free: 0.299 
  • R-Value Work: 0.255 
  • R-Value Observed: 0.256 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of Lumazine synthase from Salmonella typhimurium LT2

Kumar, P.Singh, M.Karthikeyan, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
6,7-dimethyl-8-ribityllumazine synthase
AA [auth 1], BA [auth 2], CA [auth 3], DA [auth 4], A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
156Salmonella enterica subsp. enterica serovar Typhimurium str. LT2Mutation(s): 0 
Gene Names: ribHSTM0417
EC: 2.5.1.78
UniProt
Find proteins for P66038 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore P66038 
Go to UniProtKB:  P66038
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AB [auth Q] , BB [auth Q] , CB [auth Q] , DB [auth R] , EA [auth A] , EB [auth S] , FA [auth B] , FB [auth U] , 
AB [auth Q],  BB [auth Q],  CB [auth Q],  DB [auth R],  EA [auth A],  EB [auth S],  FA [auth B],  FB [auth U],  GA [auth C],  GB [auth V],  HA [auth C],  HB [auth V],  IA [auth D],  IB [auth X],  JA [auth D],  JB [auth X],  KA [auth E],  KB [auth Z],  LA [auth F],  LB [auth Z],  MA [auth F],  MB [auth 1],  NA [auth G],  NB [auth 1],  OA [auth H],  OB [auth 2],  PA [auth H],  PB [auth 2],  QA [auth H],  QB [auth 2],  RA [auth J],  RB [auth 3],  SA [auth K],  TA [auth L],  UA [auth L],  VA [auth M],  WA [auth M],  XA [auth M],  YA [auth N],  ZA [auth P]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.50 Å
  • R-Value Free: 0.299 
  • R-Value Work: 0.255 
  • R-Value Observed: 0.256 
  • Space Group: I 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 174.43α = 90
b = 157.49β = 91.58
c = 202.788γ = 90
Software Package:
Software NamePurpose
MAR345dtbdata collection
PHASERphasing
CCP4model building
PHENIXrefinement
MOSFLMdata reduction
SCALAdata scaling
CCP4phasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-06-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2013-01-23
    Changes: Structure summary