Download MendeleyThe crystal structure of ABC transporter from Rhodopseudomonas palustris
Zhang, Z., Burley, S.K., Swaminathan, S.To be published.
3NND
The crystal structure of ABC transporter from Rhodopseudomonas palustris
- PDB DOI: 10.2210/pdb3NND/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Rhodopseudomonas palustris
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2010-06-23 Released: 2010-10-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.296
- R-Value Work: 0.244
- R-Value Observed: 0.246
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Possible substrate binding protein of ABC transporter system | B [auth A], A [auth B], C, D | 366 | Rhodopseudomonas palustris | Mutation(s): 0 Gene Names: RPA4397 |  |
UniProt | |||||
Find proteins for Q6N1K8 (Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)) Explore Q6N1K8 Go to UniProtKB: Q6N1K8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6N1K8 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A [auth B], B [auth A], C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.296
- R-Value Work: 0.244
- R-Value Observed: 0.246
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 80.742 | α = 90 |
| b = 118.427 | β = 106.87 |
| c = 93.464 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SOLVE | phasing |
| PHENIX | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
Entry History
Deposition Data
- Released Date: 2010-10-13 Deposition Author(s): Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2010-10-13
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2021-02-10
Changes: Database references, Derived calculations, Structure summary
