3N81

T244A mutant of Human mitochondrial aldehyde dehydrogenase, apo form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.182 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Conformational Selection During Catalysis: The role of Threonine 244 in ALDH2

Ho, K.-K.Gonzalez-Segura, L.Perez-Miller, S.Weiner, H.Hurley, T.D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Aldehyde dehydrogenase, mitochondrial
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H
500Homo sapiensMutation(s): 1 
Gene Names: ALDH2ALDM
EC: 1.2.1.3
UniProt & NIH Common Fund Data Resources
Find proteins for P05091 (Homo sapiens)
Explore P05091 
Go to UniProtKB:  P05091
PHAROS:  P05091
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP05091
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download Ideal Coordinates CCD File 
AA [auth C],
BA [auth C],
CA [auth C],
DB [auth G],
EB [auth G],
AA [auth C],
BA [auth C],
CA [auth C],
DB [auth G],
EB [auth G],
FB [auth G],
HA [auth D],
IA [auth D],
JB [auth H],
KB [auth H],
L [auth A],
LB [auth H],
M [auth A],
MA [auth E],
N [auth A],
NA [auth E],
O [auth A],
OA [auth E],
S [auth B],
T [auth B],
U [auth B],
UA [auth F],
VA [auth F],
WA [auth F],
XA [auth F],
YA [auth F],
Z [auth C]
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
GAI
Query on GAI

Download Ideal Coordinates CCD File 
AB [auth G],
BB [auth G],
CB [auth G],
EA [auth D],
FA [auth D],
AB [auth G],
BB [auth G],
CB [auth G],
EA [auth D],
FA [auth D],
GA [auth D],
HB [auth H],
IB [auth H],
J [auth A],
K [auth A],
KA [auth E],
LA [auth E],
Q [auth B],
QA [auth F],
R [auth B],
RA [auth F],
SA [auth F],
TA [auth F],
W [auth C],
X [auth C],
Y [auth C]
GUANIDINE
C H5 N3
ZRALSGWEFCBTJO-UHFFFAOYSA-N
 Ligand Interaction
NA
Query on NA

Download Ideal Coordinates CCD File 
DA [auth D],
GB [auth H],
I [auth A],
JA [auth E],
P [auth B],
DA [auth D],
GB [auth H],
I [auth A],
JA [auth E],
P [auth B],
PA [auth F],
V [auth C],
ZA [auth G]
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.182 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 141.75α = 90
b = 152.194β = 90
c = 177.292γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000data scaling
REFMACphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-04-13
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-11-08
    Changes: Refinement description
  • Version 1.3: 2018-01-31
    Changes: Database references