3LLW

Crystal structure of geranyltransferase from helicobacter pylori 26695


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of Geranyltransferase from Helicobacter Pylori

Patskovsky, Y.Toro, R.Rutter, M.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Geranyltranstransferase (IspA)
A, B, C, D
311Helicobacter pylori (strain ATCC 700392 / 26695)Mutation(s): 0 
Find proteins for O25583 (Helicobacter pylori (strain ATCC 700392 / 26695))
Go to UniProtKB:  O25583
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C, D
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.196 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 59.040α = 90.00
b = 123.844β = 92.67
c = 111.617γ = 90.00
Software Package:
Software NamePurpose
RESOLVEmodel building
REFMACrefinement
PHENIXphasing
SHELXphasing
RESOLVEphasing
HKL-2000data scaling
SHELXmodel building
PHENIXmodel building
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-03-31
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2018-11-21
    Type: Data collection, Structure summary