3LD1

Crystal Structure of IBV Nsp2a


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.216 
  • R-Value Observed: 0.219 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

IBV nsp2 is an endosome-associated protein and viral pathogenicity factor

Xu, Y.Ye, Z.Wei, L.Cong, L.Fu, J.Chen, C.Yang, A.Wu, W.Tang, H.Bartlam, M.Rao, Z.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Replicase polyprotein 1aA359Avian infectious bronchitis virus (strain M41)Mutation(s): 3 
Gene Names: 1a1ab
EC: 3.4.22
Find proteins for P0C6V5 (Avian infectious bronchitis virus (strain M41))
Explore P0C6V5 
Go to UniProtKB:  P0C6V5
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.216 
  • R-Value Observed: 0.219 
  • Space Group: P 64
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 114.179α = 90
b = 114.179β = 90
c = 60.979γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
SOLVEphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-05-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-11-01
    Changes: Refinement description