Macromolecule Content

Total Structure Weight: 30.54 kDa
Atom Count: 1919
Residue Count: 245
Unique protein chains: 1

3L86

The Crystal Structure of smu.665 from Streptococcus mutans UA159

DOI: 10.2210/pdb3L86/pdb

Classification: TRANSFERASE
Organism(s): Streptococcus mutans UA159
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2009-12-30 Released: 2011-01-05
Deposition Author(s): Su, X.-D., Liu, X., Wu, C.W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.06 Å
R-Value Free: 0.267
R-Value Work: 0.213
R-Value Observed: 0.216

wwPDB Validation3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The Crystal Structure of smu.665 from Streptococcus mutans UA159

Su, X.-D., Liu, X., Wu, C.W.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Acetylglutamate kinase	A	279	Streptococcus mutans UA159	Mutation(s): 0 Gene Names: smu.665, argB, SMU_665 EC: 2.7.2.8
Find proteins for Q8DV44 (Streptococcus mutans serotype c (strain ATCC 700610 / UA159)) Explore Q8DV44 Go to UniProtKB: Q8DV44
Protein Feature View
( Mouse scroll to zoom / Hold left click to move ) Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ADP Query on ADP Download CCD File	A	ADENOSINE-5'-DIPHOSPHATE C₁₀ H₁₅ N₅ O₁₀ P₂ XTWYTFMLZFPYCI-KQYNXXCUSA-N		Ligand Interaction
NLG Query on NLG Download CCD File	A	N-ACETYL-L-GLUTAMATE C₇ H₁₁ N O₅ RFMMMVDNIPUKGG-YFKPBYRVSA-N		Ligand Interaction
MG Query on MG Download CCD File	A	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.06 Å
R-Value Free: 0.267
R-Value Work: 0.213
R-Value Observed: 0.216
Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 57.19	α = 90
b = 94.76	β = 90
c = 47.58	γ = 90

Software Package:

Software Name	Purpose
MAR345dtb	data collection
MOLREP	phasing
REFMAC	refinement
XDS	data reduction
XDS	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2009-12-30
Released Date: 2011-01-05

Deposition Author(s):

Revision History

Version 1.0: 2011-01-05
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.