3L32

Structure of the dimerisation domain of the rabies virus phosphoprotein

• PDB DOI:  https://doi.org/10.2210/pdb3L32/pdb

• Classification: VIRAL PROTEIN
• Organism(s): Rabies virus China/MRV
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-12-16 Released: 2010-02-16 
• Deposition Author(s): Ivanov, I., Crepin, T., Jamin, M., Ruigrok, R.W.H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.50 Å
• R-Value Free: 0.228 
• R-Value Work: 0.196 
• R-Value Observed: 0.198 

Literature

Structure of the dimerisation domain of the rabies virus phosphoprotein

Ivanov, I., Crepin, T., Jamin, M., Ruigrok, R.W.H.

(2010) J Virol 

• PubMed: 20089657 
• DOI: https://doi.org/10.1128/JVI.02557-09
• Primary Citation of Related Structures:  
  3L32


• PubMed Abstract: 
  

The crystal structure of the dimerization domain of rabies virus phosphoprotein was determined. The monomer consists of two alpha-helices that make a helical hairpin held together mainly by hydrophobic interactions. The monomer has a hydrophilic and a hydrophobic face, and in the dimer two monomers pack together through their hydrophobic surfaces. This structure is very different from the dimerization domain of the vesicular stomatitis virus phosphoprotein and also from the tetramerization domain of the Sendai virus phosphoprotein, suggesting that oligomerization is conserved but not structure.

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Organizational Affiliation: 

UVHCI, UMI 3265 UJF-EMBL-CNRS, BP 181, 38042 Grenoble, Cedex 9, France.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 10.69 kDa 
• Atom Count: 811 
• Modelled Residue Count: 89 
• Deposited Residue Count: 90 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phosphoprotein	A, B	45	Rabies virus China/MRV	Mutation(s): 0  Gene Names: P
UniProt
Find proteins for Q0GBY3 (Rabies virus (strain China/MRV)) Explore Q0GBY3  Go to UniProtKB:  Q0GBY3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.50 Å
• R-Value Free: 0.228 
• R-Value Work: 0.196 
• R-Value Observed: 0.198 
• Space Group: I 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.29	α = 90
b = 43.29	β = 90
c = 192.02	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
XSCALE	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-02-16 
Deposition Author(s): Ivanov, I., Crepin, T., Jamin, M., Ruigrok, R.W.H.

Revision History  

• Version 1.0: 2010-02-16
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance