A dimeric mutant of DHDPS from Mycobacterium tuberculosis
Evans, G.L., Schuldt, L., Griffin, M.D., Perugini, M.A., Jamerson, G.B., Devenish, S.R., Weiss, M.S., Gerrard, J.A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Dihydrodipicolinate synthase | 304 | Mycobacterium tuberculosis | Mutation(s): 1  Gene Names: dapA, MT2823, MTV002.18c, Rv2753c EC: 4.2.1.52 | ||
UniProt | |||||
Find proteins for P9WP25 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WP25  Go to UniProtKB:  P9WP25 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P9WP25 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | FA [auth C] FB [auth F] G [auth A] GA [auth C] GB [auth F] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | CA [auth B] CB [auth E] DB [auth E] EA [auth B] IA [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
PYR Query on PYR | DA [auth B] | PYRUVIC ACID C3 H4 O3 LCTONWCANYUPML-UHFFFAOYSA-N | |||
BME Query on BME | Q [auth A] | BETA-MERCAPTOETHANOL C2 H6 O S DGVVWUTYPXICAM-UHFFFAOYSA-N | |||
ACT Query on ACT | AA [auth B] AB [auth E] BA [auth B] BB [auth E] HB [auth F] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CL Query on CL | EB [auth E], UA [auth D], VA [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CME Query on CME | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O3 S2 | CYS | |
KPI Query on KPI | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C9 H16 N2 O4 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 188.83 | α = 90 |
b = 188.83 | β = 90 |
c = 130.43 | γ = 90 |
Software Name | Purpose |
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MxCuBE | data collection |
MOLREP | phasing |
REFMAC | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |