3L1W

The crystal structure of a functionally unknown conserved protein from Enterococcus faecalis V583


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.167 
  • R-Value Observed: 0.168 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

The crystal structure of a functionally unknown conserved protein from Enterococcus faecalis V583

Tan, K.Rakowski, E.Jedrzejczak, R.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Uncharacterized proteinA, B, C, D, E, F257Enterococcus faecalisMutation(s): 0 
Gene Names: EF_1237
Find proteins for Q835Y1 (Enterococcus faecalis (strain ATCC 700802 / V583))
Explore Q835Y1 
Go to UniProtKB:  Q835Y1
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
BA [auth D] , CA [auth D] , DA [auth D] , EA [auth D] , G [auth A] , H [auth A] , I [auth A] , IA [auth E] , 
BA [auth D],  CA [auth D],  DA [auth D],  EA [auth D],  G [auth A],  H [auth A],  I [auth A],  IA [auth E],  J [auth A],  JA [auth E],  KA [auth E],  LA [auth E],  N [auth B],  O [auth B],  P [auth B],  PA [auth F],  Q [auth B],  QA [auth F],  RA [auth F],  SA [auth F],  U [auth C],  V [auth C],  W [auth C],  X [auth C]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
EDO
Query on EDO

Download Ideal Coordinates CCD File 
FA [auth D], K [auth A], MA [auth E], R [auth B], TA [auth F], Y [auth C]1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
FMT
Query on FMT

Download Ideal Coordinates CCD File 
AA [auth C] , GA [auth D] , HA [auth D] , L [auth A] , M [auth A] , NA [auth E] , OA [auth E] , S [auth B] , 
AA [auth C],  GA [auth D],  HA [auth D],  L [auth A],  M [auth A],  NA [auth E],  OA [auth E],  S [auth B],  T [auth B],  UA [auth F],  VA [auth F],  Z [auth C]
FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, FL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.167 
  • R-Value Observed: 0.168 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 68.565α = 89.88
b = 68.558β = 89.79
c = 104.245γ = 60.07
Software Package:
Software NamePurpose
SBC-Collectdata collection
SHELXDphasing
MLPHAREphasing
DMmodel building
ARPmodel building
WARPmodel building
HKL-3000phasing
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
DMphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-01-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance