Crystal Structure of Putative Sugar-Binding Domain of Transcriptional Repressor from Vibrio fischeri
Kim, Y., Marshall, N., Bearden, J., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
Transcriptional repressor | A | 267 | Aliivibrio fischeri (strain ATCC 700601 / ES114) | Mutation(s): 0  Gene Names: lsrR EC: 2.7.1.69 |
Find proteins for Q5E0H6 (Aliivibrio fischeri (strain ATCC 700601 / ES114)) Go to UniProtKB:  Q5E0H6 |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | A | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | ![]() | MET |
Length (Å) | Angle (°) |
---|---|
a = 129.382 | α = 90.00 |
b = 43.474 | β = 104.15 |
c = 47.536 | γ = 90.00 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
SHELXS | phasing |
RESOLVE | phasing |
HKL-3000 | data reduction |
HKL-3000 | data collection |
SOLVE | phasing |
RESOLVE | model building |
HKL-3000 | data scaling |
HKL-3000 | phasing |
MLPHARE | phasing |
PHENIX | refinement |