3KGZ

Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.199 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris

Bonanno, J.B.Freeman, J.Bain, K.T.Do, J.Romero, R.Wasserman, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cupin 2 conserved barrel domain protein
A, B
156Rhodopseudomonas palustris (strain TIE-1)Mutation(s): 0 
Find proteins for B3QER1 (Rhodopseudomonas palustris (strain TIE-1))
Go to UniProtKB:  B3QER1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A, B
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.199 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 36.854α = 90.00
b = 80.382β = 90.00
c = 110.081γ = 90.00
Software Package:
Software NamePurpose
MAR345data collection
PDB_EXTRACTdata extraction
SHELXEmodel building
MOSFLMdata reduction
SCALAdata scaling
REFMACrefinement
SHELXCDphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-11-24
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance
  • Version 1.2: 2017-11-01
    Type: Refinement description
  • Version 1.3: 2018-11-21
    Type: Data collection, Structure summary