3KE6 | pdb_00003ke6

The crystal structure of the RsbU and RsbW domains of Rv1364c from Mycobacterium tuberculosis

• PDB DOI: https://doi.org/10.2210/pdb3KE6/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Mycobacterium tuberculosis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-10-24 Released: 2010-11-10 
• Deposition Author(s): King-Scott, J., Panjikar, S., Tucker, P.A.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free: 
  0.267 (Depositor), 0.310 (DCC) 
• R-Value Work: 
  0.208 (Depositor), 0.276 (DCC) 
• R-Value Observed: 
  0.211 (Depositor) 

Literature

The crystal structure of the RsbU and RsbW domains of Rv1364c from Mycobacterium tuberculosis

King-Scott, J., Panjikar, S., Tucker, P.A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 3 generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 85.06 kDa 
• Atom Count: 5,304 
• Modeled Residue Count: 702 
• Deposited Residue Count: 798 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein Rv1364c/MT1410	A, B	399	Mycobacterium tuberculosis	Mutation(s): 0  Gene Names: MT1410, MTCY02B10.28c, Rv1364c EC: 2.7.11.1 (UniProt), 3.1.3.16 (UniProt)
UniProt
Find proteins for P9WLZ7 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WLZ7  Go to UniProtKB:  P9WLZ7

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	C [auth A]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L
GOL	D [auth A]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
MN	E [auth A], F [auth A], G [auth B], H [auth B]	MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free:  0.267 (Depositor), 0.310 (DCC) 
• R-Value Work:  0.208 (Depositor), 0.276 (DCC) 
• R-Value Observed: 0.211 (Depositor) 

Space Group: P 4₃ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 100.118	α = 90
b = 100.118	β = 90
c = 169.653	γ = 90

Software Package:

Software Name	Purpose
MAR345dtb	data collection
MOLREP	phasing
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-11-10 
Deposition Author(s): King-Scott, J., Panjikar, S., Tucker, P.A.

Revision History  

• Version 1.0: 2010-11-10
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2024-02-21
  Changes: Data collection, Database references, Derived calculations, Refinement description