Download MendeleyCrystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus
Park, A.K., Moon, J.H., Chi, Y.M.To be published.
3KE4
Crystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus
- PDB DOI: 10.2210/pdb3KE4/pdb
- Classification: TRANSFERASE
- Organism(s): Bacillus cereus ATCC 14579
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-10-23 Released: 2010-10-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.206
- R-Value Work: 0.182
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical Cytosolic Protein | A, B, C | 213 | Bacillus cereus ATCC 14579 | Mutation(s): 0 Gene Names: BC_1479 EC: 2.5.1.17 |  |
UniProt | |||||
Find proteins for Q813T7 (Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)) Explore Q813T7 Go to UniProtKB: Q813T7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q813T7 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| DIO Query on DIO | D [auth A], E [auth A], F [auth B], G [auth B], H [auth B], | 1,4-DIETHYLENE DIOXIDE C4 H8 O2 RYHBNJHYFVUHQT-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.206
- R-Value Work: 0.182
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 64.927 | α = 90 |
| b = 137.083 | β = 90 |
| c = 158.551 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| CNS | refinement |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Deposited Date: 2009-10-23
- Released Date: 2010-10-20 Deposition Author(s): Park, A.K., Moon, J.H., Chi, Y.M.
Revision History (Full details and data files)
- Version 1.0: 2010-10-20
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description
