3ISA

CRYSTAL STRUCTURE OF putative enoyl-CoA hydratase/isomerase FROM Bordetella parapertussis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

CRYSTAL STRUCTURE OF enoyl-CoA hydratase FROM Bordetella parapertussis

Patskovsky, Y.Malashkevich, V.Toro, R.Foti, R.Dickey, M.Miller, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Putative enoyl-CoA hydratase/isomerase
A, B, C, D, E
A, B, C, D, E, F
254Bordetella parapertussisMutation(s): 0 
Gene Names: BPP4107
UniProt
Find proteins for Q7W3D6 (Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253))
Explore Q7W3D6 
Go to UniProtKB:  Q7W3D6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ7W3D6
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download Ideal Coordinates CCD File 
AB [auth E]
GA [auth C]
GB [auth F]
HA [auth C]
IB [auth F]
AB [auth E],
GA [auth C],
GB [auth F],
HA [auth C],
IB [auth F],
N [auth A],
NA [auth D],
P [auth A],
QA [auth D],
X [auth B],
Y [auth B],
Z [auth B],
ZA [auth E]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
CL
Query on CL

Download Ideal Coordinates CCD File 
AA [auth C]
BA [auth C]
BB [auth E]
CA [auth C]
CB [auth E]
AA [auth C],
BA [auth C],
BB [auth E],
CA [auth C],
CB [auth E],
DA [auth C],
DB [auth F],
EA [auth C],
EB [auth F],
FA [auth C],
FB [auth F],
G [auth A],
H [auth A],
HB [auth F],
I [auth A],
IA [auth D],
J [auth A],
JA [auth D],
JB [auth F],
K [auth A],
KA [auth D],
L [auth A],
LA [auth D],
M [auth A],
MA [auth D],
O [auth A],
OA [auth D],
PA [auth D],
Q [auth B],
R [auth B],
RA [auth D],
S [auth B],
SA [auth D],
T [auth B],
TA [auth E],
U [auth B],
UA [auth E],
V [auth B],
VA [auth E],
W [auth B],
WA [auth E],
XA [auth E],
YA [auth E]
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 203.837α = 90
b = 120.825β = 110.37
c = 78.577γ = 90
Software Package:
Software NamePurpose
SHELXmodel building
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
SHELXphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2009-09-01
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Non-polymer description, Version format compliance
  • Version 1.2: 2018-11-21
    Changes: Data collection, Structure summary
  • Version 1.3: 2021-02-10
    Changes: Database references, Derived calculations, Structure summary
  • Version 1.4: 2024-02-21
    Changes: Data collection, Database references