Download MendeleyCrystal Structure of Electron Transfer Flavoprotein alpha-subunit from Bacteroides thetaiotaomicron
Kim, Y., Sather, A., Clancy, S., Joachimiak, A.To be published.
3IH5 | pdb_00003ih5
Crystal Structure of Electron Transfer Flavoprotein alpha-subunit from Bacteroides thetaiotaomicron
- PDB DOI: https://doi.org/10.2210/pdb3IH5/pdb
- Classification: ELECTRON TRANSPORT
- Organism(s): Bacteroides thetaiotaomicron
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-07-29 Released: 2009-09-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.215 (Depositor), 0.216 (DCC)
- R-Value Work: 0.179 (Depositor), 0.181 (DCC)
- R-Value Observed: 0.180 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Electron transfer flavoprotein alpha-subunit | 217 | Bacteroides thetaiotaomicron | Mutation(s): 0 Gene Names: BT_1805 |  | |
UniProt | |||||
Find proteins for Q8A6S1 (Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)) Explore Q8A6S1 Go to UniProtKB: Q8A6S1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8A6S1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MLA Query on MLA | E [auth A], F [auth A], I [auth D] | MALONIC ACID C3 H4 O4 OFOBLEOULBTSOW-UHFFFAOYSA-N |  | ||
| FMT Query on FMT | H [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |  | ||
| NA Query on NA | G [auth A], J [auth D] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.215 (Depositor), 0.216 (DCC)
- R-Value Work: 0.179 (Depositor), 0.181 (DCC)
- R-Value Observed: 0.180 (Depositor)
Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 102.099 | α = 90 |
| b = 102.099 | β = 90 |
| c = 209.169 | γ = 120 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-3000 | phasing |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | model building |
| RESOLVE | model building |
| Coot | model building |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| DM | phasing |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2009-09-08 Deposition Author(s): Kim, Y., Sather, A., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2009-09-08
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2015-04-29
Changes: Non-polymer description - Version 1.3: 2024-10-16
Changes: Data collection, Database references, Derived calculations, Structure summary
