Biological Assembly 1  

 3D View: Structure | Electron Density

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 24.69 kDa 
• Atom Count: 1653 
• Modelled Residue Count: 213 
• Deposited Residue Count: 223 
• Unique protein chains: 1

3IC6

Crystal structure of putative methylase family protein from Neisseria gonorrhoeae

• DOI: 10.2210/pdb3IC6/pdb

• Classification: structural genomics, unknown function
• Organism(s): Neisseria gonorrhoeae FA 1090
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2009-07-17 Released: 2009-08-04 
• Deposition Author(s): Chang, C., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.59 Å
• R-Value Free: 0.244 
• R-Value Work: 0.209 
• R-Value Observed: 0.210 

Literature

Crystal structure of putative methylase family protein from Neisseria gonorrhoeae

Chang, C., Marshall, N., Cobb, G., Joachimiak, A.

To be published.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative methylase family protein	A	223	Neisseria gonorrhoeae FA 1090	Mutation(s): 0  Gene Names: NGO0670, NGO_0670
UniProt
Find proteins for Q5F8U0 (Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)) Explore Q5F8U0  Go to UniProtKB:  Q5F8U0

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.59 Å
• R-Value Free: 0.244 
• R-Value Work: 0.209 
• R-Value Observed: 0.210 
• Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 73.123	α = 90
b = 73.123	β = 90
c = 193.315	γ = 120

Software Package:

Software Name	Purpose
SBC-Collect	data collection
HKL-3000	phasing
SHELXD	phasing
SHELXE	model building
MLPHARE	phasing
DM	model building
RESOLVE	model building
Coot	model building
ARP/wARP	model building
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling
DM	phasing
RESOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2009-07-17 
• Released Date: 2009-08-04 
Deposition Author(s): Chang, C., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2009-08-04
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Advisory, Refinement description, Version format compliance
• Version 1.2: 2017-11-01
  Changes: Refinement description