3HUU | pdb_00003huu

Crystal structure of transcription regulator like protein from Staphylococcus haemolyticus

PDB DOI: https://doi.org/10.2210/pdb3HUU/pdb

Classification: Transcription regulator
Organism(s): Staphylococcus haemolyticus JCSC1435
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2009-06-15 Released: 2009-07-07
Deposition Author(s): Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free:
0.274 (Depositor), 0.273 (DCC)
R-Value Work:
0.237 (Depositor), 0.238 (DCC)
R-Value Observed:
0.237 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3HUU

This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of transcription regulator like protein from Staphylococcus haemolyticus

Agarwal, R., Burley, S.K., Swaminathan, S.

To be published.

Macromolecule Content

Total Structure Weight: 138.82 kDa
Atom Count: 8,497
Modeled Residue Count: 1,057
Deposited Residue Count: 1,220
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcription regulator like protein	A, B, C, D	305	Staphylococcus haemolyticus JCSC1435	Mutation(s): 0 Gene Names: SH1407
UniProt
Find proteins for Q4L6K9 (Staphylococcus haemolyticus (strain JCSC1435)) Explore Q4L6K9 Go to UniProtKB: Q4L6K9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4L6K9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.274 (Depositor), 0.273 (DCC)
R-Value Work: 0.237 (Depositor), 0.238 (DCC)
R-Value Observed: 0.237 (Depositor)

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.872	α = 82.42
b = 68.08	β = 75.95
c = 97.835	γ = 79.39

Software Package:

Software Name	Purpose
CBASS	data collection
SHELXD	phasing
CNS	refinement
HKL-2000	data reduction
SCALEPACK	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-07-07

Deposition Author(s):

Swaminathan, S.

New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History (Full details and data files)

Version 1.0: 2009-07-07
Type: Initial release
Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance
Version 1.2: 2021-02-10
Changes: Database references, Structure summary
Version 1.3: 2024-02-21
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.