The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A
Stein, A.J., Xu, X., Cui, H., Ng, J., Edwards, A., Savchenko, A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Isochorismatase hydrolase | 204 | Alkaliphilus metalliredigens QYMF | Mutation(s): 0  Gene Names: Amet_4583 | ![]() | |
UniProt | |||||
Find proteins for A6TWT6 (Alkaliphilus metalliredigens (strain QYMF)) Explore A6TWT6  Go to UniProtKB:  A6TWT6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A6TWT6 | ||||
Protein Feature ViewExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | J [auth A], M [auth B], P [auth E], Q [auth F], R [auth G] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N | Ligand Interaction | ||
NH4 Query on NH4 | I [auth A], K [auth C], L [auth B], N [auth D], O [auth E], | AMMONIUM ION H4 N QGZKDVFQNNGYKY-UHFFFAOYSA-O | Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B [auth C], C [auth B], D, E, | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 85.651 | α = 90 |
b = 105.425 | β = 103.9 |
c = 106.267 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-3000 | phasing |
SHELX | phasing |
MLPHARE | phasing |
DM | phasing |
ARP/wARP | model building |
Coot | model building |