3H49

Crystal structure of a putative Ribokinase (Apo Form) from E.coli at 1.8A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of a putative Ribokinase (Apo Form) from E.coli at 1.8A resolution.

Satyanarayana, L.Eswaramoorthy, S.Burley, S.K.Swaminathan, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ribokinase
A, B
325Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: ydjH
EC: 2.7.1.-
Find proteins for P77493 (Escherichia coli (strain K12))
Go to UniProtKB:  P77493
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.213 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 48.088α = 90.00
b = 73.718β = 96.49
c = 82.153γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
HKL-2000data scaling
SHARPphasing
CNSrefinement
CBASSdata collection
SHELXCDphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-04-28
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance