3GO2

Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.185 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium.

Bonanno, J.B.Dickey, M.Bain, K.T.Chang, S.Ozyurt, S.Wasserman, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative L-alanine-DL-glutamate epimerase
A
409Paraburkholderia xenovorans (strain LB400)Mutation(s): 0 
Find proteins for Q13PB7 (Paraburkholderia xenovorans (strain LB400))
Go to UniProtKB:  Q13PB7
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.185 
  • R-Value Work: 0.152 
  • Space Group: I 4 2 2
Unit Cell:
Length (Å)Angle (°)
a = 104.697α = 90.00
b = 104.697β = 90.00
c = 145.828γ = 90.00
Software Package:
Software NamePurpose
SHELXCDphasing
MAR345data collection
HKL-2000data scaling
HKL-2000data reduction
REFMACrefinement
SHELXEmodel building
SCALAdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-03-31
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.2: 2017-11-01
    Type: Refinement description
  • Version 1.3: 2018-11-21
    Type: Data collection, Structure summary