Crystal structure of trans-aconitate 3-methyltransferase from yeast
Burgie, E.S., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Trans-aconitate 3-methyltransferase | 299 | Saccharomyces cerevisiae | Mutation(s): 0  Gene Names: P32643, S000000977, SYGP-ORF63, TAM1, TMT1, YER175C EC: 2.1.1.145 | ||
UniProt | |||||
Find proteins for P32643 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P32643  Go to UniProtKB:  P32643 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P32643 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SAH Query on SAH | J [auth A] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N | |||
T8N Query on T8N | K [auth A] | (2E)-2-(2-methoxy-2-oxoethyl)but-2-enedioic acid C7 H8 O6 MRNZYUAGJLJQAM-DUXPYHPUSA-N | |||
DMS Query on DMS | L [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
EDO Query on EDO | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 36.834 | α = 90 |
b = 91.891 | β = 90 |
c = 104.269 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
SHARP | phasing |
DM | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Blu-Ice | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |