Download MendeleyThe crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis
Miallau, L., Chernishof, I., Chiang, J., Arbing, M., Cascio, D., Eisenberg, D.To be published.
3G5O
The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis
- PDB DOI: 10.2210/pdb3G5O/pdb
- Classification: TOXIN/ANTITOXIN
- Organism(s): Mycobacterium tuberculosis H37Rv
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-02-05 Released: 2009-04-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.246
- R-Value Work: 0.202
- R-Value Observed: 0.205
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein Rv2865 | A, D | 108 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: Rv2865, relF, relB2 |  |
UniProt | |||||
Find proteins for O33347 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore O33347 Go to UniProtKB: O33347 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O33347 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein Rv2866 | B, C | 102 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: Rv2866, relG, relE2 EC: 3.1 |  |
UniProt | |||||
Find proteins for O33348 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore O33348 Go to UniProtKB: O33348 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O33348 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| TRS Query on TRS | I [auth C] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |  | Ligand Interaction | |
| GOL Query on GOL | G [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| IMD Query on IMD | H [auth A] | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O |  | Ligand Interaction | |
| SCN Query on SCN | E [auth A] | THIOCYANATE ION C N S ZMZDMBWJUHKJPS-UHFFFAOYSA-M |  | Ligand Interaction | |
| CL Query on CL | F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.246
- R-Value Work: 0.202
- R-Value Observed: 0.205
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 75.54 | α = 90 |
| b = 79.481 | β = 90 |
| c = 86.278 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| SHELXD | phasing |
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Deposited Date: 2009-02-05
- Released Date: 2009-04-14 Deposition Author(s): Miallau, L., Cascio, D., Eisenberg, D., TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)
Revision History (Full details and data files)
- Version 1.0: 2009-04-14
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance
