Download Mendeleystructural studies of ecTBP
Cui, S., Wollmann, P., Moldt, M., Hopfner, K.-P.To be published.
3EIK
double stranded DNA binding protein
- PDB DOI: https://doi.org/10.2210/pdb3EIK/pdb
- Classification: TRANSCRIPTION
- Organism(s): Encephalitozoon cuniculi
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-09-16 Released: 2009-09-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.235
- R-Value Work: 0.177
- R-Value Observed: 0.180
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| TATA-box-binding protein | 218 | Encephalitozoon cuniculi | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q8ST28 (Encephalitozoon cuniculi (strain GB-M1)) Explore Q8ST28 Go to UniProtKB: Q8ST28 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8ST28 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | C [auth A] D [auth A] E [auth A] F [auth A] G [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.235
- R-Value Work: 0.177
- R-Value Observed: 0.180
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 104.4 | α = 90 |
| b = 104.4 | β = 90 |
| c = 129.06 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| remdaq.pilatus | data collection |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2009-09-22 Deposition Author(s): Cui, S., Wollmann, P., Moldt, M., Hopfner, K.-P.
Revision History (Full details and data files)
- Version 1.0: 2009-09-22
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-08-30
Changes: Data collection, Database references, Refinement description
