Download MendeleyCrystal structure of the RhoGAP domain of ARHGAP11A
Shen, Y., Shen, L., Tong, Y., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H.To be published.
3EAP
Crystal structure of the RhoGAP domain of ARHGAP11A
- DOI: 10.2210/pdb3EAP/pdb
- Classification: hydrolase activator
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-08-26 Released: 2008-09-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.277
- R-Value Work: 0.227
- R-Value Observed: 0.230
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Rho GTPase-activating protein 11A | A, B, C, D | 271 | Homo sapiens | Mutation(s): 0 Gene Names: ARHGAP11A, KIAA0013 |  |
Find proteins for Q6P4F7 (Homo sapiens) Explore Q6P4F7 Go to UniProtKB: Q6P4F7 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: Q6P4F7 GTEx: ENSG00000198826 | |||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| UNX Query on UNX | A, B, C | UNKNOWN ATOM OR ION X |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.277
- R-Value Work: 0.227
- R-Value Observed: 0.230
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 46.066 | α = 90 |
| b = 106.15 | β = 97.16 |
| c = 107.335 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| tlsmd | refinement |
| FFAS03/SCWRL | refinement |
| Coot | model building |
| MolProbity | model building |
Entry History
Deposition Data
- Deposited Date: 2008-08-26
- Released Date: 2008-09-02 Deposition Author(s): Shen, Y., Shen, L., Tong, Y., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium, Structural Genomics Consortium (SGC)
Revision History (Full details and data files)
- Version 1.0: 2008-09-02
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2020-10-14
Changes: Data collection, Database references, Derived calculations, Refinement description
