Crystal structure of Putative Oxygenase (YP_001051978.1) from SHEWANELLA BALTICA OS155 at 2.26 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
PKHD-type hydroxylase Sbal_3634 | 243 | Shewanella baltica OS155 | Mutation(s): 0  Gene Names: YP_001051978.1, Sbal_3634 EC: 1.14.11 | ![]() | |
UniProt | |||||
Find proteins for A3D8P6 (Shewanella baltica (strain OS155 / ATCC BAA-1091)) Explore A3D8P6  Go to UniProtKB:  A3D8P6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A3D8P6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | G [auth A] H [auth A] I [auth A] J [auth A] K [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
IMD Query on IMD | E [auth A] F [auth A] M [auth B] N [auth B] P [auth C] | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O | |||
NI Query on NI | D [auth A], L [auth B], O [auth C] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 153.452 | α = 90 |
b = 153.452 | β = 90 |
c = 84.851 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PHENIX | refinement |
SHELX | phasing |
MolProbity | model building |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
SHELXD | phasing |
autoSHARP | phasing |