The role of molecular modeling in the design of analogues of the fungicidal natural products crocacins A and D.Crowley, P.J., Berry, E.A., Cromartie, T., Daldal, F., Godfrey, C.R., Lee, D.W., Phillips, J.E., Taylor, A., Viner, R.
(2008) Bioorg.Med.Chem. 16: 10345-10355
- PubMed: 18996700
- DOI: 10.1016/j.bmc.2008.10.030
- PubMed Abstract:
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Extensive molecular modeling based on crystallographic data was used to aid the design of synthetic analogues of the fungicidal naturally occurring respiration inhibitors crocacins A and D, and an inhibitor binding model to the mammalian cytochrome b ...
Extensive molecular modeling based on crystallographic data was used to aid the design of synthetic analogues of the fungicidal naturally occurring respiration inhibitors crocacins A and D, and an inhibitor binding model to the mammalian cytochrome bc(1) complex was constructed. Simplified analogues were made which showed high activity in a mitochondrial beef heart respiration assay, and which were also active against certain plant pathogens in glasshouse tests. A crystal structure was obtained of an analogue of crocacin D bound to the chicken heart cytochrome bc(1) complex, which validated the binding model and which confirmed that the crocacins are a new class of inhibitor of the cytochrome bc(1) complex.
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