3BVC

Crystal structure of uncharacterized protein Ism_01780 from Roseovarius nubinhibens ISM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.255 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of an uncharacterized protein Ism_01780 from Roseovarius nubinhibens.

Patskovsky, Y.Toro, R.Meyer, A.J.Rutter, M.Iizuka, M.Maletic, M.Smith, D.Wasserman, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Uncharacterized protein Ism_01780
A, B
212Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)Mutation(s): 0 
Find proteins for A3SHZ8 (Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM))
Go to UniProtKB:  A3SHZ8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A, B
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
NI
Query on NI

Download SDF File 
Download CCD File 
A, B
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.298 
  • R-Value Work: 0.255 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 96.405α = 90.00
b = 101.973β = 90.00
c = 76.506γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
MAR345data collection
HKL-2000data reduction
HKL-2000data scaling
SHELXDphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2008-02-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description
  • Version 1.3: 2018-11-14
    Type: Data collection, Structure summary