Download MendeleyX-ray crystal structure of nitrilotriacetate monooxygenase component B from Bacillus cereus.
Osipiuk, J., Quartey, P., Abdullah, J., Joachimiak, A.To be published.
3BPK
Crystal structure of nitrilotriacetate monooxygenase component B from Bacillus cereus
- PDB DOI: 10.2210/pdb3BPK/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus cereus ATCC 14579
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2007-12-18 Released: 2008-01-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.56 Å
- R-Value Free: 0.187
- R-Value Work: 0.153
- R-Value Observed: 0.155
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Nitrilotriacetate monooxygenase component B | A, B | 206 | Bacillus cereus ATCC 14579 | Mutation(s): 0 Gene Names: BC_5322 EC: 1.14.13 |  |
UniProt | |||||
Find proteins for Q814U7 (Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)) Explore Q814U7 Go to UniProtKB: Q814U7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q814U7 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| CL Query on CL | C [auth A], D [auth A], F [auth B], G [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.56 Å
- R-Value Free: 0.187
- R-Value Work: 0.153
- R-Value Observed: 0.155
- Space Group: P 61 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 76.807 | α = 90 |
| b = 76.807 | β = 90 |
| c = 295.788 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-2000 | data reduction |
| SHELXD | phasing |
| MLPHARE | phasing |
| DM | phasing |
| SOLVE | phasing |
| RESOLVE | phasing |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2008-01-01 Deposition Author(s): Osipiuk, J., Quartey, P., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2008-01-01
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description
