3B0F

Crystal structure of the UBA domain of p62 and its interaction with ubiquitin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.170 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the UBA domain of p62 and its interaction with ubiquitin

Isogai, S.Morimoto, D.Arita, K.Unzai, S.Tenno, T.Hasegawa, J.Sou, Y.Komatsu, M.Tanaka, K.Shirakawa, M.Tochio, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sequestosome-1
A, B
53Mus musculusMutation(s): 0 
Gene Names: Sqstm1 (A170, STAP)
Find proteins for Q64337 (Mus musculus)
Go to UniProtKB:  Q64337
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.170 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 72.967α = 90.00
b = 72.967β = 90.00
c = 32.560γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SOLVEphasing
HKL-2000data scaling
SERGUIdata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-06-29
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-11
    Type: Refinement description