3AHU

Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.259 
  • R-Value Observed: 0.259 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer.

Someya, T.Baba, S.Fujimoto, M.Kumasaka, T.Kawai, G.Nakamura, K.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Protein hfqA, B, C78Bacillus subtilisMutation(s): 0 
Gene Names: BSU17340hfqymaH
UniProt
Find proteins for O31796 (Bacillus subtilis (strain 168))
Explore O31796 
Go to UniProtKB:  O31796
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO31796
Protein Feature View
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  • Reference Sequence

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Entity ID: 2
MoleculeChainsLengthOrganismImage
5'-R(*AP*GP*AP*GP*AP*G)-3'D [auth X]6N/A
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.259 
  • R-Value Observed: 0.259 
  • Space Group: F 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 91.921α = 90
b = 92.504β = 90
c = 114.918γ = 90
Software Package:
Software NamePurpose
BSSdata collection
MOLREPphasing
CNSrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-07-13
    Type: Initial release