3U03

The structure of Human Siderocalin bound to the bacterial siderophore pyochelin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.303 
  • R-Value Work: 0.269 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The structure of Human Siderocalin bound to the bacterial siderophore pyochelin

Clifton, M.C.Edwards, T.E.Seattle Structural Genomics Center for Infectious DiseaseStrong, R.K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Neutrophil gelatinase-associated lipocalin
A, C
198Homo sapiensMutation(s): 1 
Gene Names: LCN2 (HNL, NGAL)
Find proteins for P80188 (Homo sapiens)
Go to Gene View: LCN2
Go to UniProtKB:  P80188
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
488
Query on 488

Download SDF File 
Download CCD File 
A, C
(2R,4R)-2-[(4R)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-thiazol-4-yl]-3-methyl-1,3-thiazolidine-4-carboxylic acid
Pyochelin
C14 H16 N2 O3 S2
NYBZAGXTZXPYND-GBIKHYSHSA-N
 Ligand Interaction
FE
Query on FE

Download SDF File 
Download CCD File 
A, C
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.303 
  • R-Value Work: 0.269 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 114.803α = 90.00
b = 114.803β = 90.00
c = 119.238γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
REFMACphasing
HKL-2000data scaling
REFMACrefinement
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-11-16
    Type: Initial release