2YW3

Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.214 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.185 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1

Kawano, Y.Hashimoto, K.Kamiya, N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolaseA, B, C, D, E, F207Thermus thermophilus HB8Mutation(s): 0 
Gene Names: TTHB072
EC: 4.1.2.14
UniProt
Find proteins for Q53W90 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q53W90 
Go to UniProtKB:  Q53W90
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download Ideal Coordinates CCD File 
G [auth A] , H [auth B] , I [auth B] , J [auth B] , K [auth C] , L [auth D] , M [auth D] , N [auth D] , 
G [auth A], H [auth B], I [auth B], J [auth B], K [auth C], L [auth D], M [auth D], N [auth D], O [auth D], P [auth E], Q [auth E], R [auth E], S [auth E], T [auth F], U [auth F], V [auth F], W [auth F]
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.214 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.185 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 125.922α = 90
b = 72.685β = 91.07
c = 161.312γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
Rapiddata collection
HKL-2000data reduction
HKL-2000data scaling
CNSphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-10-23
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Derived calculations, Source and taxonomy, Version format compliance