2YSB | pdb_00002ysb

Solution structure of the first WW domain from the mouse salvador homolog 1 protein (SAV1)

PDB DOI: https://doi.org/10.2210/pdb2YSB/pdb

Classification: PROTEIN BINDING
Organism(s): Mus musculus
Mutation(s): No

Deposited: 2007-04-03 Released: 2007-10-09
Deposition Author(s): Ohnishi, S., Sato, M., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2YSB

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the first WW domain from the mouse salvador homolog 1 protein (SAV1)

Ohnishi, S., Sato, M., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 5.35 kDa
Atom Count: 377
Modeled Residue Count: 49
Deposited Residue Count: 49
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Salvador homolog 1 protein	A	49	Mus musculus	Mutation(s): 0 Gene Names: Sav1
UniProt
Find proteins for Q8VEB2 (Mus musculus) Explore Q8VEB2 Go to UniProtKB: Q8VEB2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8VEB2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-10-09

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-10-09
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.