2VWF

Grb2 SH3C (2)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.188 
  • R-Value Observed: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Distinct Binding Modes of Two Epitopes in Gab2 that Interact with the Sh3C Domain of Grb2.

Harkiolaki, M.Tsirka, T.Lewitzky, M.Simister, P.C.Joshi, D.Bird, L.E.Jones, E.Y.O'Reilly, N.Feller, S.M.

(2009) Structure 17: 809

  • DOI: 10.1016/j.str.2009.03.017
  • Structures With Same Primary Citation

  • PubMed Abstract: 
  • Grb2 and Gab2 form a complex implicated in normal cell signaling and cancer development. Binding of the Grb2SH3C domain to Gab2 is essential for the interaction, but molecular details remained undefined. Using peptide arrays and isothermal titration ...

    Grb2 and Gab2 form a complex implicated in normal cell signaling and cancer development. Binding of the Grb2SH3C domain to Gab2 is essential for the interaction, but molecular details remained undefined. Using peptide arrays and isothermal titration calorimetry, two Grb2SH3C binding sites in Gab2 (Gab2a and Gab2b) were confirmed and characterized. Gab2a bears similarity to a p27Kip1 epitope that also binds Grb2SH3C. Crystal structures of both Gab2 epitopes complexed with Grb2SH3C reveal that Gab2b contains a 3(10) helix that positions the arginine and lysine of the core-binding motif RxxK in parallel orientation. In contrast, the Gab2a RxxK motif is embedded in a PPII helix with Arg and Lys in staggered orientation. A similar interaction mode is also present in a new complex of Mona/GadsSH3C with an RxxxxK epitope from the putative phosphatase HD-PTP. In summary, our study reveals interaction types of SH3 domains, highlighting their great versatility.


    Organizational Affiliation

    Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX37BN, UK.



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
A
58Homo sapiensMutation(s): 1 
Gene Names: GRB2ASH
Find proteins for P62993 (Homo sapiens)
Go to UniProtKB:  P62993
NIH Common Fund Data Resources
PHAROS  P62993
  • Find similar proteins by: Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
GRB2-ASSOCIATED-BINDING PROTEIN 2
B
15Homo sapiensMutation(s): 0 
Gene Names: GAB2KIAA0571
Find proteins for Q9UQC2 (Homo sapiens)
Go to UniProtKB:  Q9UQC2
NIH Common Fund Data Resources
PHAROS  Q9UQC2
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.188 
  • R-Value Observed: 0.190 
  • Space Group: P 65 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 41.166α = 90
b = 41.166β = 90
c = 107.915γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-05-19
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance