2VCI

4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential Therapeutic Agents for the Treatment of Cancer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.207 
  • R-Value Observed: 0.211 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

4,5-diarylisoxazole Hsp90 chaperone inhibitors: potential therapeutic agents for the treatment of cancer.

Brough, P.A.Aherne, W.Barril, X.Borgognoni, J.Boxall, K.Cansfield, J.E.Cheung, K.M.Collins, I.Davies, N.G.Drysdale, M.J.Dymock, B.Eccles, S.A.Finch, H.Fink, A.Hayes, A.Howes, R.Hubbard, R.E.James, K.Jordan, A.M.Lockie, A.Martins, V.Massey, A.Matthews, T.P.McDonald, E.Northfield, C.J.Pearl, L.H.Prodromou, C.Ray, S.Raynaud, F.I.Roughley, S.D.Sharp, S.Y.Surgenor, A.Walmsley, D.L.Webb, P.Wood, M.Workman, P.Wright, L.

(2008) J Med Chem 51: 196-218

  • DOI: 10.1021/jm701018h
  • Primary Citation of Related Structures:  
    2VCI, 2VCJ

  • PubMed Abstract: 
  • Inhibitors of the Hsp90 molecular chaperone are showing considerable promise as potential chemotherapeutic agents for cancer. Here, we describe the structure-based design, synthesis, structure-activity relationships and pharmacokinetics of potent sma ...

    Inhibitors of the Hsp90 molecular chaperone are showing considerable promise as potential chemotherapeutic agents for cancer. Here, we describe the structure-based design, synthesis, structure-activity relationships and pharmacokinetics of potent small-molecule inhibitors of Hsp90 based on the 4,5-diarylisoxazole scaffold. Analogues from this series have high affinity for Hsp90, as measured in a fluorescence polarization (FP) competitive binding assay, and are active in cancer cell lines where they inhibit proliferation and exhibit a characteristic profile of depletion of oncogenic proteins and concomitant elevation of Hsp72. Compound 40f (VER-52296/NVP-AUY922) is potent in the Hsp90 FP binding assay (IC50 = 21 nM) and inhibits proliferation of various human cancer cell lines in vitro, with GI50 averaging 9 nM. Compound 40f is retained in tumors in vivo when administered i.p., as evaluated by cassette dosing in tumor-bearing mice. In a human colon cancer xenograft model, 40f inhibits tumor growth by approximately 50%.


    Organizational Affiliation

    Vernalis Ltd., Granta Park, Great Abington, Cambridge CB21 6GB, U.K. p.brough@ vernalis.com



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
HEAT SHOCK PROTEIN HSP 90-ALPHAA236Homo sapiensMutation(s): 0 
Gene Names: HSP90AA1HSP90AHSPC1HSPCA
Find proteins for P07900 (Homo sapiens)
Explore P07900 
Go to UniProtKB:  P07900
NIH Common Fund Data Resources
PHAROS  P07900
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
2GJ
Query on 2GJ

Download CCD File 
A
5-[2,4-DIHYDROXY-5-(1-METHYLETHYL)PHENYL]-N-ETHYL-4-[4-(MORPHOLIN-4-YLMETHYL)PHENYL]ISOXAZOLE-3-CARBOXAMIDE
C26 H31 N3 O5
NDAZATDQFDPQBD-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
2GJEC50:  7   nM  BindingDB
2GJKi:  0.07000000029802322   nM  BindingDB
2GJIC50:  8   nM  BindingDB
2GJIC50 :  21   nM  PDBBind
2GJIC50:  31   nM  BindingDB
2GJKi:  8.199999809265137   nM  BindingDB
2GJIC50:  12   nM  BindingDB
2GJIC50:  61   nM  BindingDB
2GJKi:  0.05999999865889549   nM  BindingDB
2GJIC50:  59   nM  BindingDB
2GJIC50:  7   nM  BindingDB
2GJIC50:  7.800000190734863   nM  BindingDB
2GJEC50:  16   nM  BindingDB
2GJKd:  1.7000000476837158   nM  BindingDB
2GJIC50:  22   nM  BindingDB
2GJIC50:  61   nM  BindingDB
2GJIC50:  25   nM  BindingDB
2GJKi:  9   nM  BindingDB
2GJIC50:  21   nM  Binding MOAD
2GJIC50:  21   nM  BindingDB
2GJIC50:  85   nM  BindingDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.207 
  • R-Value Observed: 0.211 
  • Space Group: I 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 65.144α = 90
b = 88.454β = 90
c = 99.025γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
d*TREKdata reduction
SCALEPACKdata scaling
AMoREphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2007-12-11
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2018-02-28
    Changes: Database references