2RT6

Backbone 1H, 13C, and 15N Chemical Shift Assignments for PriC N-terminal domain

• PDB DOI: https://doi.org/10.2210/pdb2RT6/pdb
• BMRB: 11525

• Classification: DNA BINDING PROTEIN
• Organism(s): Escherichia coli K-12
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2013-04-24 Released: 2013-08-07 
• Deposition Author(s): Aramaki, T., Abe, Y., Katayama, T., Ueda, T.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.

Aramaki, T., Abe, Y., Katayama, T., Ueda, T.

(2013) Protein Sci 22: 1279-1286

• PubMed: 23868391 
• DOI: https://doi.org/10.1002/pro.2314
• Primary Citation of Related Structures:  
  2RT6


• PubMed Abstract: 
  

  In eubacterial organisms, the oriC-independent primosome plays an essential role in replication restart after the dissociation of the replication DNA-protein complex by DNA damage. PriC is a key protein component in the replication restart primosome. Our recent study suggested that PriC is divided into two domains: an N-terminal and a C-terminal domain. In the present study, we determined the solution structure of the N-terminal domain, whose structure and function have remained unknown until now. The revealed structure was composed of three helices and one extended loop. We also observed chemical shift changes in the heteronuclear NMR spectrum and oligomerization in the presence of ssDNA. These abilities may contribute to the PriC-ssDNA complex, which is important for the replication restart primosome.

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Organizational Affiliation: 

Department of Protein Structure, Function and Design, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, 812-8582, Japan.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 11.01 kDa 
• Atom Count: 774 
• Modelled Residue Count: 98 
• Deposited Residue Count: 98 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Primosomal replication protein N''	A	98	Escherichia coli K-12	Mutation(s): 0  Gene Names: b0467, JW0456, priC
UniProt
Find proteins for P23862 (Escherichia coli (strain K12)) Explore P23862  Go to UniProtKB:  P23862

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-08-07 
Deposition Author(s): Aramaki, T., Abe, Y., Katayama, T., Ueda, T.

Revision History  

• Version 1.0: 2013-08-07
  Type: Initial release
  
• Version 1.1: 2022-08-24
  Changes: Data collection, Database references
• Version 1.2: 2023-06-14
  Changes: Other
• Version 1.3: 2024-05-15
  Changes: Data collection, Database references