2R1T

dopamine quinone conjugation to DJ-1

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.208 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history. 

Literature

DJ-1 is a proisopeptidase

Zhongtao, Z., Yue, F.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DJ-1
A
187Homo sapiensMutation(s): 1 
Gene Names: PARK7
EC: 3.1.2.-, 3.5.1.-, 3.5.1.124
Find proteins for Q99497 (Homo sapiens)
Go to Gene View: PARK7
Go to UniProtKB:  Q99497
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
DJ-1
B
187Homo sapiensMutation(s): 1 
Gene Names: PARK7
EC: 3.1.2.-, 3.5.1.-, 3.5.1.124
Find proteins for Q99497 (Homo sapiens)
Go to Gene View: PARK7
Go to UniProtKB:  Q99497
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
DYS
Query on DYS
B
L-PEPTIDE LINKINGC11 H16 N2 O4 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.208 
  • Space Group: P 31
Unit Cell:
Length (Å)Angle (°)
a = 75.468α = 90.00
b = 75.468β = 90.00
c = 75.504γ = 120.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
CNSphasing
CNSrefinement
DENZOdata reduction
HKL-3000data collection
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History 

Deposition Data

  • Deposited Date: 2007-08-23 
  • Released Date: 2008-08-26 
  • Deposition Author(s): Zhongtao, Z., Yue, F.

Revision History 

  • Version 1.0: 2008-08-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description, Source and taxonomy